Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'EntitySet'

Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
authored 1 INSTANCE InstanceEdit PhysicalEntity   INTEGER(10) UNSIGNED
cellType 1 INSTANCE CellType PhysicalEntity ALL INTEGER(10) UNSIGNED
compartment + INSTANCE EntityCompartment PhysicalEntity   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
crossReference + INSTANCE DatabaseIdentifier PhysicalEntity   INTEGER(10) UNSIGNED
definition 1 TEXT N/A PhysicalEntity   TEXT
disease + INSTANCE Disease PhysicalEntity   INTEGER(10) UNSIGNED
edited + INSTANCE InstanceEdit PhysicalEntity   INTEGER(10) UNSIGNED
figure + INSTANCE Figure PhysicalEntity   INTEGER(10) UNSIGNED
goCellularComponent 1 INSTANCE GO_CellularComponent PhysicalEntity   INTEGER(10) UNSIGNED
hasMember + INSTANCE PhysicalEntity EntitySet   INTEGER(10) UNSIGNED
inferredFrom + INSTANCE PhysicalEntity PhysicalEntity   INTEGER(10) UNSIGNED
inferredTo + INSTANCE PhysicalEntity PhysicalEntity   INTEGER(10) UNSIGNED
isOrdered 1 OTHER N/A EntitySet   ENUM('TRUE','FALSE')
literatureReference + INSTANCE Publication PhysicalEntity   INTEGER(10) UNSIGNED
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
name + TEXT N/A PhysicalEntity   TEXT
relatedSpecies + INSTANCE Species EntitySet   INTEGER(10) UNSIGNED
reviewed + INSTANCE InstanceEdit PhysicalEntity   INTEGER(10) UNSIGNED
revised + INSTANCE InstanceEdit PhysicalEntity   INTEGER(10) UNSIGNED
species + INSTANCE Species EntitySet   INTEGER(10) UNSIGNED
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED
summation + INSTANCE Summation PhysicalEntity   INTEGER(10) UNSIGNED
systematicName 1 TEXT N/A PhysicalEntity   TEXT

Referers of class 'EntitySet' instances

Class name Attribute name Cardinality
Polymer repeatedUnit +
ReactionlikeEvent entityOnOtherCell +
Depolymerisation entityOnOtherCell +
Polymerisation entityOnOtherCell +
FailedReaction entityOnOtherCell +
Reaction entityOnOtherCell +
Complex entityOnOtherCell +
BlackBoxEvent entityOnOtherCell +
CandidateSet hasMember +
DefinedSet hasMember +
EntitySet hasMember +
OpenSet hasMember +
ReactionlikeEvent input +
Depolymerisation input +
Polymerisation input +
Reaction input +
FailedReaction input +
BlackBoxEvent input +
NegativeGeneExpressionRegulation activeUnit +
PositiveGeneExpressionRegulation activeUnit +
NegativeRegulation activeUnit +
PositiveRegulation activeUnit +
Requirement activeUnit +
Regulation activeUnit +
CatalystActivity activeUnit +
Complex hasComponent +
ProteinDrug inferredTo +
Polymer inferredTo +
EntitySet inferredTo +
Complex inferredTo +
SimpleEntity inferredTo +
OpenSet inferredTo +
RNADrug inferredTo +
PhysicalEntity inferredTo +
CandidateSet inferredTo +
EntityWithAccessionedSequence inferredTo +
Drug inferredTo +
ChemicalDrug inferredTo +
GenomeEncodedEntity inferredTo +
DefinedSet inferredTo +
OtherEntity inferredTo +
CandidateSet hasCandidate +
Drug inferredFrom +
ChemicalDrug inferredFrom +
EntityWithAccessionedSequence inferredFrom +
GenomeEncodedEntity inferredFrom +
OtherEntity inferredFrom +
DefinedSet inferredFrom +
Polymer inferredFrom +
ProteinDrug inferredFrom +
OpenSet inferredFrom +
SimpleEntity inferredFrom +
EntitySet inferredFrom +
Complex inferredFrom +
RNADrug inferredFrom +
CandidateSet inferredFrom +
PhysicalEntity inferredFrom +
NegativeGeneExpressionRegulation regulator 1
PositiveGeneExpressionRegulation regulator 1
NegativeRegulation regulator 1
Requirement regulator 1
Regulation regulator 1
PositiveRegulation regulator 1
InterChainCrosslinkedResidue modification 1
GroupModifiedResidue modification 1
IntraChainCrosslinkedResidue modification 1
CrosslinkedResidue modification 1
ReactionlikeEvent requiredInputComponent +
Depolymerisation requiredInputComponent +
Polymerisation requiredInputComponent +
FailedReaction requiredInputComponent +
Reaction requiredInputComponent +
BlackBoxEvent requiredInputComponent +
ConcurrentEventSet focusEntity +
VertexSearchableTerm termProvider +
EntityVertex representedInstance 1
CatalystActivity physicalEntity 1
EntityFunctionalStatus physicalEntity 1
FailedReaction output +
Reaction output +
BlackBoxEvent output +
ReactionlikeEvent output +
Depolymerisation output +
Polymerisation output +
_Deleted replacementInstances +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.