Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'

Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances

Class name Attribute name Cardinality
Depolymerisation edited +
EntityWithAccessionedSequence edited +
NegativeRegulation edited +
Pathway edited +
Event edited +
Regulation edited +
OtherEntity edited +
ProteinDrug edited +
PhysicalEntity edited +
GenomeEncodedEntity edited +
BlackBoxEvent edited +
PositiveRegulation edited +
SimpleEntity edited +
Reaction edited +
OpenSet edited +
Drug edited +
ChemicalDrug edited +
NegativeGeneExpressionRegulation edited +
Polymerisation edited +
RNADrug edited +
Polymer edited +
Complex edited +
FailedReaction edited +
PositiveGeneExpressionRegulation edited +
CandidateSet edited +
Requirement edited +
EntitySet edited +
DefinedSet edited +
ReactionlikeEvent edited +
_InstanceBeforeChange instanceEdit 1
Depolymerisation revised +
EntityWithAccessionedSequence revised +
Pathway revised +
NegativeRegulation revised +
Regulation revised +
Event revised +
OtherEntity revised +
ProteinDrug revised +
PhysicalEntity revised +
GenomeEncodedEntity revised +
BlackBoxEvent revised +
SimpleEntity revised +
PositiveRegulation revised +
Reaction revised +
OpenSet revised +
ChemicalDrug revised +
Drug revised +
Polymerisation revised +
NegativeGeneExpressionRegulation revised +
RNADrug revised +
Polymer revised +
Complex revised +
PositiveGeneExpressionRegulation revised +
CandidateSet revised +
FailedReaction revised +
EntitySet revised +
Requirement revised +
ReactionlikeEvent revised +
DefinedSet revised +
RNADrug authored 1
Complex authored 1
Polymer authored 1
FailedReaction authored +
CandidateSet authored 1
PositiveGeneExpressionRegulation authored 1
DefinedSet authored 1
ReactionlikeEvent authored +
EntitySet authored 1
Requirement authored 1
OtherEntity authored 1
Event authored +
Regulation authored 1
ProteinDrug authored 1
EntityWithAccessionedSequence authored 1
Depolymerisation authored +
NegativeRegulation authored 1
Pathway authored +
GenomeEncodedEntity authored 1
PhysicalEntity authored 1
PositiveRegulation authored 1
Reaction authored +
SimpleEntity authored 1
OpenSet authored 1
BlackBoxEvent authored +
NegativeGeneExpressionRegulation authored 1
Polymerisation authored +
Drug authored 1
ChemicalDrug authored 1
IntraChainCrosslinkedResidue created 1
Edge created 1
ReactionVertex created 1
CellType created 1
Requirement created 1
_Release created 1
ExternalOntology created 1
Complex created 1
Disease created 1
VertexSearchableTerm created 1
Publication created 1
LiteratureReference created 1
BlackBoxEvent created 1
DatabaseIdentifier created 1
ReferenceIsoform created 1
ReferenceRNASequence created 1
Depolymerisation created 1
PathwayDiagramItem created 1
ReferenceDNASequence created 1
URL created 1
CandidateSet created 1
FailedReaction created 1
TranslationalModification created 1
DatabaseObject created 1
CrosslinkedResidue created 1
Polymer created 1
ReferenceGeneProduct created 1
PathwayCoordinates created 1
PositiveRegulation created 1
ReferenceEntity created 1
SimpleEntity created 1
EntityCompartment created 1
_AttributeValueBeforeChange created 1
GO_BiologicalProcess created 1
ControlledVocabulary created 1
Polymerisation created 1
FragmentReplacedModification created 1
InterChainCrosslinkedResidue created 1
ChemicalDrug created 1
Drug created 1
ReferenceDatabase created 1
Summation created 1
GO_CellularComponent created 1
Event created 1
Taxon created 1
GeneticallyModifiedResidue created 1
PathwayVertex created 1
StableIdentifier created 1
DeletedControlledVocabulary created 1
Figure created 1
Vertex created 1
ReferenceGroup created 1
GO_MolecularFunction created 1
PsiMod created 1
PositiveGeneExpressionRegulation created 1
DefinedSet created 1
Book created 1
RNADrug created 1
CatalystActivity created 1
InstanceEdit created 1
AbstractModifiedResidue created 1
ConcurrentEventSet created 1
Reaction created 1
FunctionalStatusType created 1
EntityFunctionalStatus created 1
FrontPage created 1
ReferenceTherapeutic created 1
NegativeGeneExpressionRegulation created 1
ReferenceMolecule created 1
FragmentInsertionModification created 1
OtherEntity created 1
Pathway created 1
EntityWithAccessionedSequence created 1
EvidenceType created 1
PhysicalEntity created 1
ReferenceSequence created 1
_InstanceBeforeChange created 1
Person created 1
PathwayDiagram created 1
ReactionlikeEvent created 1
EntitySet created 1
Affiliation created 1
EntityVertex created 1
FragmentModification created 1
_Deleted created 1
OpenSet created 1
Compartment created 1
FunctionalStatus created 1
ReactionCoordinates created 1
ModifiedResidue created 1
Species created 1
ProteinDrug created 1
Regulation created 1
NegativeRegulation created 1
FragmentDeletionModification created 1
GenomeEncodedEntity created 1
SequenceOntology created 1
GroupModifiedResidue created 1
ReplacedResidue created 1
_Deleted modified +
FragmentModification modified +
EntityVertex modified +
Affiliation modified +
EntitySet modified +
PathwayDiagram modified +
ReactionlikeEvent modified +
Person modified +
_InstanceBeforeChange modified +
ReplacedResidue modified +
GroupModifiedResidue modified +
SequenceOntology modified +
GenomeEncodedEntity modified +
NegativeRegulation modified +
FragmentDeletionModification modified +
Regulation modified +
ProteinDrug modified +
Species modified +
ModifiedResidue modified +
ReactionCoordinates modified +
FunctionalStatus modified +
Compartment modified +
OpenSet modified +
ConcurrentEventSet modified +
AbstractModifiedResidue modified +
InstanceEdit modified +
CatalystActivity modified +
RNADrug modified +
Book modified +
DefinedSet modified +
PositiveGeneExpressionRegulation modified +
PsiMod modified +
ReferenceGroup modified +
GO_MolecularFunction modified +
PhysicalEntity modified +
ReferenceSequence modified +
EvidenceType modified +
EntityWithAccessionedSequence modified +
Pathway modified +
OtherEntity modified +
FragmentInsertionModification modified +
ReferenceMolecule modified +
NegativeGeneExpressionRegulation modified +
ReferenceTherapeutic modified +
FrontPage modified +
EntityFunctionalStatus modified +
FunctionalStatusType modified +
Reaction modified +
PathwayCoordinates modified +
ReferenceGeneProduct modified +
Polymer modified +
CrosslinkedResidue modified +
DatabaseObject modified +
TranslationalModification modified +
FailedReaction modified +
CandidateSet modified +
ReferenceDNASequence modified +
URL modified +
Vertex modified +
Figure modified +
PathwayVertex modified +
DeletedControlledVocabulary modified +
StableIdentifier modified +
GeneticallyModifiedResidue modified +
Taxon modified +
Event modified +
ReferenceDatabase modified +
Summation modified +
GO_CellularComponent modified +
Drug modified +
ChemicalDrug modified +
InterChainCrosslinkedResidue modified +
FragmentReplacedModification modified +
Polymerisation modified +
GO_BiologicalProcess modified +
ControlledVocabulary modified +
_AttributeValueBeforeChange modified +
EntityCompartment modified +
PositiveRegulation modified +
ReferenceEntity modified +
SimpleEntity modified +
Publication modified +
Disease modified +
ExternalOntology modified +
VertexSearchableTerm modified +
Complex modified +
Requirement modified +
_Release modified +
CellType modified +
Edge modified +
ReactionVertex modified +
IntraChainCrosslinkedResidue modified +
PathwayDiagramItem modified +
Depolymerisation modified +
ReferenceRNASequence modified +
ReferenceIsoform modified +
DatabaseIdentifier modified +
BlackBoxEvent modified +
LiteratureReference modified +
PhysicalEntity reviewed +
GenomeEncodedEntity reviewed +
EntityWithAccessionedSequence reviewed +
Depolymerisation reviewed +
Pathway reviewed +
NegativeRegulation reviewed +
OtherEntity reviewed +
Event reviewed +
Regulation reviewed +
ProteinDrug reviewed +
ChemicalDrug reviewed +
Drug reviewed +
Polymerisation reviewed +
NegativeGeneExpressionRegulation reviewed +
BlackBoxEvent reviewed +
OpenSet reviewed +
PositiveRegulation reviewed +
SimpleEntity reviewed +
Reaction reviewed +
Polymer reviewed +
Complex reviewed +
RNADrug reviewed +
Requirement reviewed +
EntitySet reviewed +
ReactionlikeEvent reviewed +
DefinedSet reviewed +
CandidateSet reviewed +
PositiveGeneExpressionRegulation reviewed +
FailedReaction reviewed +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.