Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'

Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances

Class name Attribute name Cardinality
Complex edited +
BlackBoxEvent edited +
Polymer edited +
GenomeEncodedEntity edited +
FailedReaction edited +
Reaction edited +
OtherEntity edited +
RNADrug edited +
Pathway edited +
ChemicalDrug edited +
EntitySet edited +
ReactionlikeEvent edited +
ProteinDrug edited +
EntityWithAccessionedSequence edited +
DefinedSet edited +
SimpleEntity edited +
CandidateSet edited +
Event edited +
PhysicalEntity edited +
Drug edited +
Polymerisation edited +
Depolymerisation edited +
BlackBoxEvent authored +
GenomeEncodedEntity authored 1
Polymer authored 1
Complex authored 1
Pathway authored +
Reaction authored +
OtherEntity authored 1
FailedReaction authored +
RNADrug authored 1
SimpleEntity authored 1
Event authored +
CandidateSet authored 1
ProteinDrug authored 1
ReactionlikeEvent authored +
ChemicalDrug authored 1
EntitySet authored 1
DefinedSet authored 1
EntityWithAccessionedSequence authored 1
Polymerisation authored +
Drug authored 1
Depolymerisation authored +
PhysicalEntity authored 1
PhysicalEntity revised +
Depolymerisation revised +
Polymerisation revised +
Drug revised +
DefinedSet revised +
EntityWithAccessionedSequence revised +
ProteinDrug revised +
EntitySet revised +
ChemicalDrug revised +
ReactionlikeEvent revised +
CandidateSet revised +
Event revised +
SimpleEntity revised +
RNADrug revised +
Reaction revised +
OtherEntity revised +
FailedReaction revised +
Pathway revised +
Complex revised +
GenomeEncodedEntity revised +
Polymer revised +
BlackBoxEvent revised +
GenomeEncodedEntity reviewed +
Polymer reviewed +
BlackBoxEvent reviewed +
Complex reviewed +
Pathway reviewed +
RNADrug reviewed +
Reaction reviewed +
OtherEntity reviewed +
FailedReaction reviewed +
Event reviewed +
CandidateSet reviewed +
SimpleEntity reviewed +
DefinedSet reviewed +
EntityWithAccessionedSequence reviewed +
ProteinDrug reviewed +
ChemicalDrug reviewed +
EntitySet reviewed +
ReactionlikeEvent reviewed +
Depolymerisation reviewed +
Polymerisation reviewed +
Drug reviewed +
PhysicalEntity reviewed +
InterChainCrosslinkedResidue modified +
Edge modified +
PathwayDiagramItem modified +
ControlledVocabulary modified +
Book modified +
CellType modified +
ReferenceGroup modified +
Affiliation modified +
FragmentReplacedModification modified +
Drug modified +
ReplacedResidue modified +
VertexSearchableTerm modified +
PositiveGeneExpressionRegulation modified +
RNADrug modified +
NegativeGeneExpressionRegulation modified +
OtherEntity modified +
ReferenceEntity modified +
ReferenceDNASequence modified +
DefinedSet modified +
FragmentDeletionModification modified +
ChemicalDrug modified +
Depolymerisation modified +
Polymerisation modified +
Species modified +
URL modified +
PathwayVertex modified +
PsiMod modified +
_Release modified +
DatabaseObject modified +
Figure modified +
GenomeEncodedEntity modified +
FunctionalStatusType modified +
BlackBoxEvent modified +
ReferenceSequence modified +
FunctionalStatus modified +
DatabaseIdentifier modified +
GO_CellularComponent modified +
DeletedControlledVocabulary modified +
CrosslinkedResidue modified +
ReactionVertex modified +
IntraChainCrosslinkedResidue modified +
AbstractModifiedResidue modified +
FragmentInsertionModification modified +
FailedReaction modified +
Event modified +
GroupModifiedResidue modified +
ModifiedResidue modified +
ProteinDrug modified +
ReactionlikeEvent modified +
GeneticallyModifiedResidue modified +
FrontPage modified +
ReferenceTherapeutic modified +
ReferenceGeneProduct modified +
InstanceEdit modified +
PhysicalEntity modified +
ExternalOntology modified +
Publication modified +
PathwayDiagram modified +
ReferenceIsoform modified +
Pathway modified +
ReferenceRNASequence modified +
CandidateSet modified +
Person modified +
Disease modified +
EntityVertex modified +
SimpleEntity modified +
StableIdentifier modified +
ReferenceMolecule modified +
Regulation modified +
EntityWithAccessionedSequence modified +
GO_MolecularFunction modified +
ReferenceDatabase modified +
EntitySet modified +
SequenceOntology modified +
Compartment modified +
Requirement modified +
FragmentModification modified +
PositiveRegulation modified +
Polymer modified +
Taxon modified +
LiteratureReference modified +
Complex modified +
Vertex modified +
NegativeRegulation modified +
Summation modified +
CatalystActivity modified +
_Deleted modified +
GO_BiologicalProcess modified +
EvidenceType modified +
TranslationalModification modified +
Reaction modified +
EntityFunctionalStatus modified +
GroupModifiedResidue created 1
Event created 1
ReactionlikeEvent created 1
ProteinDrug created 1
ModifiedResidue created 1
InstanceEdit created 1
ReferenceGeneProduct created 1
ReferenceTherapeutic created 1
GeneticallyModifiedResidue created 1
FrontPage created 1
ExternalOntology created 1
Publication created 1
PathwayDiagram created 1
PhysicalEntity created 1
ReferenceIsoform created 1
ReferenceRNASequence created 1
Pathway created 1
SimpleEntity created 1
EntityVertex created 1
Disease created 1
CandidateSet created 1
Person created 1
EntitySet created 1
ReferenceDatabase created 1
GO_MolecularFunction created 1
ReferenceMolecule created 1
EntityWithAccessionedSequence created 1
Regulation created 1
StableIdentifier created 1
Compartment created 1
SequenceOntology created 1
FragmentModification created 1
Requirement created 1
Polymer created 1
Taxon created 1
PositiveRegulation created 1
Complex created 1
LiteratureReference created 1
NegativeRegulation created 1
Vertex created 1
EvidenceType created 1
TranslationalModification created 1
EntityFunctionalStatus created 1
Reaction created 1
_Deleted created 1
GO_BiologicalProcess created 1
CatalystActivity created 1
Summation created 1
Book created 1
ControlledVocabulary created 1
PathwayDiagramItem created 1
InterChainCrosslinkedResidue created 1
Edge created 1
ReferenceGroup created 1
CellType created 1
Drug created 1
FragmentReplacedModification created 1
Affiliation created 1
VertexSearchableTerm created 1
ReplacedResidue created 1
PositiveGeneExpressionRegulation created 1
OtherEntity created 1
NegativeGeneExpressionRegulation created 1
RNADrug created 1
ReferenceDNASequence created 1
ReferenceEntity created 1
ChemicalDrug created 1
FragmentDeletionModification created 1
DefinedSet created 1
Species created 1
Polymerisation created 1
Depolymerisation created 1
Figure created 1
DatabaseObject created 1
URL created 1
PsiMod created 1
_Release created 1
PathwayVertex created 1
BlackBoxEvent created 1
GenomeEncodedEntity created 1
FunctionalStatusType created 1
DatabaseIdentifier created 1
FunctionalStatus created 1
ReferenceSequence created 1
CrosslinkedResidue created 1
DeletedControlledVocabulary created 1
GO_CellularComponent created 1
AbstractModifiedResidue created 1
IntraChainCrosslinkedResidue created 1
FragmentInsertionModification created 1
FailedReaction created 1
ReactionVertex created 1

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.