Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'

Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances

Class name Attribute name Cardinality
EntityWithAccessionedSequence authored 1
PhysicalEntity authored 1
OtherEntity authored 1
FailedReaction authored +
PositiveRegulation authored 1
CandidateSet authored 1
Polymerisation authored +
OpenSet authored 1
PositiveGeneExpressionRegulation authored 1
Event authored +
Requirement authored 1
Complex authored 1
Pathway authored +
BlackBoxEvent authored +
Regulation authored 1
NegativeRegulation authored 1
ChemicalDrug authored 1
EntitySet authored 1
NegativeGeneExpressionRegulation authored 1
GenomeEncodedEntity authored 1
DefinedSet authored 1
Drug authored 1
ReactionlikeEvent authored +
ProteinDrug authored 1
Polymer authored 1
Depolymerisation authored +
Reaction authored +
SimpleEntity authored 1
RNADrug authored 1
EntityFunctionalStatus modified +
ReplacedResidue modified +
Book modified +
Event modified +
Complex modified +
Requirement modified +
ReferenceDNASequence modified +
PhysicalEntity modified +
OtherEntity modified +
DatabaseObject modified +
CatalystActivity modified +
CandidateSet modified +
PathwayDiagram modified +
GroupModifiedResidue modified +
Drug modified +
ProteinDrug modified +
_Deleted modified +
RNADrug modified +
BlackBoxEvent modified +
CellType modified +
_InstanceBeforeChange modified +
EntitySet modified +
ModifiedResidue modified +
PositiveGeneExpressionRegulation modified +
IntraChainCrosslinkedResidue modified +
PathwayDiagramItem modified +
FragmentInsertionModification modified +
CrosslinkedResidue modified +
GO_CellularComponent modified +
Pathway modified +
EntityVertex modified +
FailedReaction modified +
LiteratureReference modified +
DatabaseIdentifier modified +
ConcurrentEventSet modified +
PsiMod modified +
Polymerisation modified +
InstanceEdit modified +
Figure modified +
ReferenceDatabase modified +
AbstractModifiedResidue modified +
ReactionlikeEvent modified +
ReferenceTherapeutic modified +
Reaction modified +
SequenceOntology modified +
Vertex modified +
Summation modified +
Regulation modified +
ReactionVertex modified +
NegativeRegulation modified +
InterChainCrosslinkedResidue modified +
ReferenceEntity modified +
OpenSet modified +
FragmentModification modified +
FunctionalStatus modified +
ReferenceIsoform modified +
Disease modified +
ReferenceMolecule modified +
Affiliation modified +
FunctionalStatusType modified +
URL modified +
Person modified +
Taxon modified +
PositiveRegulation modified +
GeneticallyModifiedResidue modified +
ReferenceGroup modified +
DefinedSet modified +
Depolymerisation modified +
FragmentReplacedModification modified +
SimpleEntity modified +
FragmentDeletionModification modified +
ChemicalDrug modified +
ReactionCoordinates modified +
PathwayCoordinates modified +
Edge modified +
_Release modified +
PathwayVertex modified +
ReferenceGeneProduct modified +
Species modified +
_AttributeValueBeforeChange modified +
StableIdentifier modified +
EntityWithAccessionedSequence modified +
FrontPage modified +
VertexSearchableTerm modified +
EvidenceType modified +
ExternalOntology modified +
Publication modified +
TranslationalModification modified +
GO_BiologicalProcess modified +
Compartment modified +
ReferenceRNASequence modified +
Polymer modified +
GO_MolecularFunction modified +
DeletedControlledVocabulary modified +
ControlledVocabulary modified +
ReferenceSequence modified +
NegativeGeneExpressionRegulation modified +
GenomeEncodedEntity modified +
VertexSearchableTerm created 1
TranslationalModification created 1
EvidenceType created 1
ExternalOntology created 1
Publication created 1
EntityWithAccessionedSequence created 1
FrontPage created 1
StableIdentifier created 1
_AttributeValueBeforeChange created 1
Species created 1
Edge created 1
PathwayCoordinates created 1
PathwayVertex created 1
ReferenceGeneProduct created 1
_Release created 1
NegativeGeneExpressionRegulation created 1
GenomeEncodedEntity created 1
ReferenceSequence created 1
Polymer created 1
GO_MolecularFunction created 1
ReferenceRNASequence created 1
ControlledVocabulary created 1
DeletedControlledVocabulary created 1
Compartment created 1
GO_BiologicalProcess created 1
Taxon created 1
PositiveRegulation created 1
Person created 1
GeneticallyModifiedResidue created 1
FunctionalStatusType created 1
URL created 1
FunctionalStatus created 1
Affiliation created 1
ReferenceMolecule created 1
ReferenceIsoform created 1
Disease created 1
FragmentModification created 1
OpenSet created 1
ReactionCoordinates created 1
FragmentDeletionModification created 1
ChemicalDrug created 1
Depolymerisation created 1
SimpleEntity created 1
FragmentReplacedModification created 1
DefinedSet created 1
ReferenceGroup created 1
PsiMod created 1
ConcurrentEventSet created 1
Polymerisation created 1
EntityVertex created 1
DatabaseIdentifier created 1
LiteratureReference created 1
FailedReaction created 1
GO_CellularComponent created 1
Pathway created 1
IntraChainCrosslinkedResidue created 1
PathwayDiagramItem created 1
PositiveGeneExpressionRegulation created 1
FragmentInsertionModification created 1
CrosslinkedResidue created 1
ReferenceEntity created 1
Summation created 1
Regulation created 1
InterChainCrosslinkedResidue created 1
NegativeRegulation created 1
ReactionVertex created 1
ReferenceTherapeutic created 1
Reaction created 1
SequenceOntology created 1
Vertex created 1
ReferenceDatabase created 1
Figure created 1
InstanceEdit created 1
ReactionlikeEvent created 1
AbstractModifiedResidue created 1
CandidateSet created 1
PathwayDiagram created 1
DatabaseObject created 1
OtherEntity created 1
PhysicalEntity created 1
CatalystActivity created 1
ReferenceDNASequence created 1
Requirement created 1
Complex created 1
EntityFunctionalStatus created 1
ReplacedResidue created 1
Event created 1
Book created 1
ModifiedResidue created 1
EntitySet created 1
_InstanceBeforeChange created 1
CellType created 1
BlackBoxEvent created 1
_Deleted created 1
RNADrug created 1
Drug created 1
GroupModifiedResidue created 1
ProteinDrug created 1
Pathway reviewed +
Requirement reviewed +
Complex reviewed +
Event reviewed +
OpenSet reviewed +
PositiveGeneExpressionRegulation reviewed +
Polymerisation reviewed +
PositiveRegulation reviewed +
CandidateSet reviewed +
FailedReaction reviewed +
EntityWithAccessionedSequence reviewed +
OtherEntity reviewed +
PhysicalEntity reviewed +
SimpleEntity reviewed +
RNADrug reviewed +
Polymer reviewed +
Reaction reviewed +
Depolymerisation reviewed +
ReactionlikeEvent reviewed +
ProteinDrug reviewed +
Drug reviewed +
DefinedSet reviewed +
GenomeEncodedEntity reviewed +
NegativeGeneExpressionRegulation reviewed +
EntitySet reviewed +
NegativeRegulation reviewed +
ChemicalDrug reviewed +
Regulation reviewed +
BlackBoxEvent reviewed +
Pathway revised +
Requirement revised +
Complex revised +
Event revised +
OpenSet revised +
PositiveGeneExpressionRegulation revised +
Polymerisation revised +
PositiveRegulation revised +
CandidateSet revised +
FailedReaction revised +
EntityWithAccessionedSequence revised +
OtherEntity revised +
PhysicalEntity revised +
SimpleEntity revised +
RNADrug revised +
Polymer revised +
Depolymerisation revised +
Reaction revised +
ProteinDrug revised +
ReactionlikeEvent revised +
DefinedSet revised +
Drug revised +
GenomeEncodedEntity revised +
NegativeGeneExpressionRegulation revised +
EntitySet revised +
NegativeRegulation revised +
ChemicalDrug revised +
BlackBoxEvent revised +
Regulation revised +
DefinedSet edited +
Drug edited +
ReactionlikeEvent edited +
ProteinDrug edited +
Polymer edited +
Depolymerisation edited +
Reaction edited +
SimpleEntity edited +
RNADrug edited +
BlackBoxEvent edited +
Regulation edited +
ChemicalDrug edited +
NegativeRegulation edited +
EntitySet edited +
NegativeGeneExpressionRegulation edited +
GenomeEncodedEntity edited +
PositiveGeneExpressionRegulation edited +
OpenSet edited +
Event edited +
Requirement edited +
Complex edited +
Pathway edited +
EntityWithAccessionedSequence edited +
OtherEntity edited +
PhysicalEntity edited +
FailedReaction edited +
PositiveRegulation edited +
CandidateSet edited +
Polymerisation edited +
_InstanceBeforeChange instanceEdit 1

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.