Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'

Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances

Class name Attribute name Cardinality
Drug reviewed +
ReactionlikeEvent reviewed +
DefinedSet reviewed +
Event reviewed +
OtherEntity reviewed +
OpenSet reviewed +
Polymerisation reviewed +
FailedReaction reviewed +
ProteinDrug reviewed +
ChemicalDrug reviewed +
Reaction reviewed +
Pathway reviewed +
SimpleEntity reviewed +
PhysicalEntity reviewed +
EntityWithAccessionedSequence reviewed +
RNADrug reviewed +
EntitySet reviewed +
GenomeEncodedEntity reviewed +
BlackBoxEvent reviewed +
CandidateSet reviewed +
Polymer reviewed +
Complex reviewed +
Depolymerisation reviewed +
Depolymerisation edited +
Complex edited +
Polymer edited +
CandidateSet edited +
BlackBoxEvent edited +
GenomeEncodedEntity edited +
EntitySet edited +
RNADrug edited +
SimpleEntity edited +
PhysicalEntity edited +
EntityWithAccessionedSequence edited +
Pathway edited +
ChemicalDrug edited +
Reaction edited +
ProteinDrug edited +
FailedReaction edited +
Polymerisation edited +
OpenSet edited +
OtherEntity edited +
DefinedSet edited +
Event edited +
ReactionlikeEvent edited +
Drug edited +
_InstanceBeforeChange instanceEdit 1
OtherEntity revised +
DefinedSet revised +
Event revised +
ReactionlikeEvent revised +
Drug revised +
ProteinDrug revised +
FailedReaction revised +
Polymerisation revised +
OpenSet revised +
GenomeEncodedEntity revised +
EntitySet revised +
RNADrug revised +
PhysicalEntity revised +
EntityWithAccessionedSequence revised +
SimpleEntity revised +
Pathway revised +
ChemicalDrug revised +
Reaction revised +
Depolymerisation revised +
Complex revised +
Polymer revised +
CandidateSet revised +
BlackBoxEvent revised +
OpenSet authored 1
Polymerisation authored +
FailedReaction authored +
ProteinDrug authored 1
ReactionlikeEvent authored +
Drug authored 1
Event authored +
DefinedSet authored 1
OtherEntity authored 1
BlackBoxEvent authored +
Polymer authored 1
CandidateSet authored 1
Complex authored 1
Depolymerisation authored +
Pathway authored +
Reaction authored +
ChemicalDrug authored 1
PhysicalEntity authored 1
EntityWithAccessionedSequence authored 1
SimpleEntity authored 1
RNADrug authored 1
GenomeEncodedEntity authored 1
EntitySet authored 1
CandidateSet created 1
Polymer created 1
ChemicalDrug created 1
GroupModifiedResidue created 1
ReactionVertex created 1
FunctionalStatusType created 1
EntitySet created 1
IntraChainCrosslinkedResidue created 1
FunctionalStatus created 1
ReactionCoordinates created 1
PositiveGeneExpressionRegulation created 1
FrontPage created 1
_InstanceBeforeChange created 1
CellType created 1
ControlledVocabulary created 1
Disease created 1
Compartment created 1
ReferenceGeneProduct created 1
ReactionlikeEvent created 1
PositiveRegulation created 1
DatabaseIdentifier created 1
ReferenceRNASequence created 1
ReferenceMolecule created 1
Affiliation created 1
Person created 1
Depolymerisation created 1
Figure created 1
EntityFunctionalStatus created 1
ReferenceGroup created 1
InstanceEdit created 1
Pathway created 1
SimpleEntity created 1
RNADrug created 1
ModifiedResidue created 1
EntityVertex created 1
ReferenceDatabase created 1
VertexSearchableTerm created 1
DatabaseObject created 1
ReferenceIsoform created 1
PathwayVertex created 1
ReferenceTherapeutic created 1
GO_CellularComponent created 1
Drug created 1
Summation created 1
InterChainCrosslinkedResidue created 1
Event created 1
LiteratureReference created 1
_AttributeValueBeforeChange created 1
DefinedSet created 1
EvidenceType created 1
GO_MolecularFunction created 1
BlackBoxEvent created 1
StableIdentifier created 1
ReferenceEntity created 1
Requirement created 1
Edge created 1
PhysicalEntity created 1
GO_BiologicalProcess created 1
Vertex created 1
SequenceOntology created 1
CrosslinkedResidue created 1
PathwayCoordinates created 1
OpenSet created 1
Polymerisation created 1
Taxon created 1
TranslationalModification created 1
PathwayDiagramItem created 1
FailedReaction created 1
ExternalOntology created 1
ProteinDrug created 1
CatalystActivity created 1
ReferenceDNASequence created 1
FragmentInsertionModification created 1
PsiMod created 1
_Deleted created 1
FragmentReplacedModification created 1
DeletedControlledVocabulary created 1
Complex created 1
_Release created 1
Reaction created 1
EntityWithAccessionedSequence created 1
Species created 1
NegativeGeneExpressionRegulation created 1
ReplacedResidue created 1
ConcurrentEventSet created 1
GeneticallyModifiedResidue created 1
GenomeEncodedEntity created 1
NegativeRegulation created 1
PathwayDiagram created 1
FragmentDeletionModification created 1
Book created 1
AbstractModifiedResidue created 1
Regulation created 1
ReferenceSequence created 1
Publication created 1
FragmentModification created 1
OtherEntity created 1
URL created 1
ExternalOntology modified +
ProteinDrug modified +
TranslationalModification modified +
PathwayDiagramItem modified +
FailedReaction modified +
Polymerisation modified +
Taxon modified +
OpenSet modified +
PsiMod modified +
ReferenceDNASequence modified +
FragmentInsertionModification modified +
CatalystActivity modified +
ReferenceEntity modified +
StableIdentifier modified +
EvidenceType modified +
GO_MolecularFunction modified +
BlackBoxEvent modified +
PathwayCoordinates modified +
Vertex modified +
CrosslinkedResidue modified +
SequenceOntology modified +
PhysicalEntity modified +
GO_BiologicalProcess modified +
Edge modified +
Requirement modified +
NegativeRegulation modified +
PathwayDiagram modified +
OtherEntity modified +
URL modified +
FragmentModification modified +
ReferenceSequence modified +
Publication modified +
Book modified +
Regulation modified +
AbstractModifiedResidue modified +
FragmentDeletionModification modified +
Complex modified +
DeletedControlledVocabulary modified +
FragmentReplacedModification modified +
_Deleted modified +
ConcurrentEventSet modified +
GenomeEncodedEntity modified +
GeneticallyModifiedResidue modified +
Species modified +
NegativeGeneExpressionRegulation modified +
ReplacedResidue modified +
EntityWithAccessionedSequence modified +
Reaction modified +
_Release modified +
PositiveGeneExpressionRegulation modified +
FrontPage modified +
_InstanceBeforeChange modified +
CellType modified +
ReactionCoordinates modified +
FunctionalStatus modified +
PositiveRegulation modified +
Compartment modified +
ReferenceGeneProduct modified +
ReactionlikeEvent modified +
ControlledVocabulary modified +
Disease modified +
CandidateSet modified +
Polymer modified +
EntitySet modified +
IntraChainCrosslinkedResidue modified +
ReactionVertex modified +
FunctionalStatusType modified +
GroupModifiedResidue modified +
ChemicalDrug modified +
PathwayVertex modified +
ReferenceTherapeutic modified +
ReferenceIsoform modified +
DatabaseObject modified +
ModifiedResidue modified +
ReferenceDatabase modified +
VertexSearchableTerm modified +
EntityVertex modified +
InterChainCrosslinkedResidue modified +
LiteratureReference modified +
Event modified +
DefinedSet modified +
_AttributeValueBeforeChange modified +
Drug modified +
Summation modified +
GO_CellularComponent modified +
Person modified +
Depolymerisation modified +
Figure modified +
ReferenceRNASequence modified +
Affiliation modified +
ReferenceMolecule modified +
DatabaseIdentifier modified +
RNADrug modified +
SimpleEntity modified +
ReferenceGroup modified +
EntityFunctionalStatus modified +
InstanceEdit modified +
Pathway modified +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.