Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'

Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances

Class name Attribute name Cardinality
CandidateSet edited +
EntityWithAccessionedSequence edited +
EntitySet edited +
GenomeEncodedEntity edited +
Polymerisation edited +
ProteinDrug edited +
RNADrug edited +
Pathway edited +
Drug edited +
Complex edited +
Polymer edited +
ReactionlikeEvent edited +
Reaction edited +
FailedReaction edited +
Event edited +
SimpleEntity edited +
ChemicalDrug edited +
Depolymerisation edited +
OtherEntity edited +
DefinedSet edited +
PhysicalEntity edited +
BlackBoxEvent edited +
ReplacedResidue created 1
Depolymerisation created 1
InstanceEdit created 1
PositiveGeneExpressionRegulation created 1
SimpleEntity created 1
IntraChainCrosslinkedResidue created 1
PositiveRegulation created 1
BlackBoxEvent created 1
LiteratureReference created 1
Summation created 1
ReferenceGeneProduct created 1
Person created 1
TranslationalModification created 1
NegativeRegulation created 1
ReferenceTherapeutic created 1
CandidateSet created 1
EntityVertex created 1
Complex created 1
ReactionlikeEvent created 1
DatabaseIdentifier created 1
FailedReaction created 1
CellType created 1
NegativeGeneExpressionRegulation created 1
Figure created 1
DeletedControlledVocabulary created 1
FragmentReplacedModification created 1
ChemicalDrug created 1
Compartment created 1
PathwayDiagramItem created 1
GroupModifiedResidue created 1
ReferenceSequence created 1
Event created 1
ReferenceMolecule created 1
ReferenceRNASequence created 1
InterChainCrosslinkedResidue created 1
Vertex created 1
Publication created 1
ReferenceIsoform created 1
PhysicalEntity created 1
_Release created 1
DefinedSet created 1
SequenceOntology created 1
PathwayVertex created 1
EntityWithAccessionedSequence created 1
ReferenceGroup created 1
PathwayDiagram created 1
URL created 1
ExternalOntology created 1
Reaction created 1
RNADrug created 1
ModifiedResidue created 1
Pathway created 1
Book created 1
Drug created 1
Affiliation created 1
GO_CellularComponent created 1
CatalystActivity created 1
ReferenceDNASequence created 1
Taxon created 1
ReferenceEntity created 1
EntityFunctionalStatus created 1
Requirement created 1
OtherEntity created 1
Regulation created 1
GeneticallyModifiedResidue created 1
Polymerisation created 1
_Deleted created 1
GO_MolecularFunction created 1
FrontPage created 1
FragmentInsertionModification created 1
ProteinDrug created 1
StableIdentifier created 1
CrosslinkedResidue created 1
GO_BiologicalProcess created 1
ControlledVocabulary created 1
Disease created 1
ReactionVertex created 1
FunctionalStatusType created 1
ReferenceDatabase created 1
VertexSearchableTerm created 1
Species created 1
EntitySet created 1
GenomeEncodedEntity created 1
PsiMod created 1
EvidenceType created 1
Edge created 1
FunctionalStatus created 1
AbstractModifiedResidue created 1
FragmentModification created 1
Polymer created 1
DatabaseObject created 1
FragmentDeletionModification created 1
Requirement modified +
OtherEntity modified +
Regulation modified +
GeneticallyModifiedResidue modified +
Taxon modified +
ReferenceEntity modified +
EntityFunctionalStatus modified +
Affiliation modified +
GO_CellularComponent modified +
CatalystActivity modified +
ReferenceDNASequence modified +
ProteinDrug modified +
FragmentInsertionModification modified +
StableIdentifier modified +
GO_BiologicalProcess modified +
CrosslinkedResidue modified +
GO_MolecularFunction modified +
FrontPage modified +
_Deleted modified +
Polymerisation modified +
ReferenceDatabase modified +
VertexSearchableTerm modified +
Species modified +
FunctionalStatusType modified +
ReactionVertex modified +
ControlledVocabulary modified +
Disease modified +
FragmentDeletionModification modified +
FunctionalStatus modified +
FragmentModification modified +
AbstractModifiedResidue modified +
DatabaseObject modified +
Polymer modified +
PsiMod modified +
EvidenceType modified +
Edge modified +
EntitySet modified +
GenomeEncodedEntity modified +
IntraChainCrosslinkedResidue modified +
LiteratureReference modified +
BlackBoxEvent modified +
PositiveRegulation modified +
Summation modified +
InstanceEdit modified +
PositiveGeneExpressionRegulation modified +
SimpleEntity modified +
ReplacedResidue modified +
Depolymerisation modified +
CellType modified +
NegativeGeneExpressionRegulation modified +
Figure modified +
DeletedControlledVocabulary modified +
Complex modified +
DatabaseIdentifier modified +
ReactionlikeEvent modified +
FailedReaction modified +
ReferenceTherapeutic modified +
CandidateSet modified +
EntityVertex modified +
Person modified +
ReferenceGeneProduct modified +
TranslationalModification modified +
NegativeRegulation modified +
InterChainCrosslinkedResidue modified +
ReferenceRNASequence modified +
Vertex modified +
ReferenceIsoform modified +
Publication modified +
_Release modified +
PhysicalEntity modified +
DefinedSet modified +
ReferenceSequence modified +
GroupModifiedResidue modified +
Event modified +
ReferenceMolecule modified +
FragmentReplacedModification modified +
ChemicalDrug modified +
Compartment modified +
PathwayDiagramItem modified +
RNADrug modified +
ModifiedResidue modified +
Pathway modified +
Book modified +
Drug modified +
URL modified +
ExternalOntology modified +
Reaction modified +
PathwayVertex modified +
EntityWithAccessionedSequence modified +
ReferenceGroup modified +
PathwayDiagram modified +
SequenceOntology modified +
OtherEntity reviewed +
PhysicalEntity reviewed +
DefinedSet reviewed +
BlackBoxEvent reviewed +
Event reviewed +
SimpleEntity reviewed +
ChemicalDrug reviewed +
Depolymerisation reviewed +
RNADrug reviewed +
ProteinDrug reviewed +
Pathway reviewed +
Drug reviewed +
Complex reviewed +
Polymer reviewed +
Reaction reviewed +
FailedReaction reviewed +
ReactionlikeEvent reviewed +
CandidateSet reviewed +
EntityWithAccessionedSequence reviewed +
EntitySet reviewed +
GenomeEncodedEntity reviewed +
Polymerisation reviewed +
BlackBoxEvent authored +
OtherEntity authored 1
PhysicalEntity authored 1
DefinedSet authored 1
ChemicalDrug authored 1
Depolymerisation authored +
Event authored +
SimpleEntity authored 1
Complex authored 1
Polymer authored 1
Reaction authored +
FailedReaction authored +
ReactionlikeEvent authored +
ProteinDrug authored 1
RNADrug authored 1
Pathway authored +
Drug authored 1
EntitySet authored 1
GenomeEncodedEntity authored 1
Polymerisation authored +
CandidateSet authored 1
EntityWithAccessionedSequence authored 1
GenomeEncodedEntity revised +
Polymerisation revised +
EntitySet revised +
CandidateSet revised +
EntityWithAccessionedSequence revised +
Polymer revised +
Reaction revised +
ReactionlikeEvent revised +
FailedReaction revised +
Complex revised +
Drug revised +
RNADrug revised +
ProteinDrug revised +
Pathway revised +
Depolymerisation revised +
ChemicalDrug revised +
SimpleEntity revised +
Event revised +
BlackBoxEvent revised +
DefinedSet revised +
PhysicalEntity revised +
OtherEntity revised +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.