Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'

Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances

Class name Attribute name Cardinality
ReferenceMolecule created 1
CandidateSet created 1
InterChainCrosslinkedResidue created 1
Pathway created 1
LiteratureReference created 1
Reaction created 1
PathwayDiagramItem created 1
PathwayDiagram created 1
FunctionalStatus created 1
ReactionlikeEvent created 1
PathwayVertex created 1
ControlledVocabulary created 1
GO_CellularComponent created 1
TranslationalModification created 1
VertexSearchableTerm created 1
ReferenceTherapeutic created 1
Depolymerisation created 1
Affiliation created 1
ExternalOntology created 1
Compartment created 1
ReplacedResidue created 1
CellType created 1
CrosslinkedResidue created 1
ProteinDrug created 1
GroupModifiedResidue created 1
RNADrug created 1
ReferenceRNASequence created 1
_Release created 1
ReferenceGroup created 1
FrontPage created 1
AbstractModifiedResidue created 1
PositiveRegulation created 1
Vertex created 1
NegativeGeneExpressionRegulation created 1
ModifiedResidue created 1
ReferenceDatabase created 1
StableIdentifier created 1
_Deleted created 1
FragmentModification created 1
Polymer created 1
EntityWithAccessionedSequence created 1
EntitySet created 1
Book created 1
URL created 1
PositiveGeneExpressionRegulation created 1
DatabaseObject created 1
Figure created 1
Polymerisation created 1
FragmentInsertionModification created 1
Edge created 1
InstanceEdit created 1
FailedReaction created 1
DatabaseIdentifier created 1
CatalystActivity created 1
Summation created 1
Regulation created 1
DefinedSet created 1
ReferenceGeneProduct created 1
EvidenceType created 1
Species created 1
FragmentDeletionModification created 1
SimpleEntity created 1
Publication created 1
ReferenceDNASequence created 1
OtherEntity created 1
Complex created 1
Drug created 1
ReferenceEntity created 1
ReferenceIsoform created 1
NegativeRegulation created 1
ReactionVertex created 1
FunctionalStatusType created 1
GO_MolecularFunction created 1
EntityFunctionalStatus created 1
Person created 1
PsiMod created 1
SequenceOntology created 1
FragmentReplacedModification created 1
Event created 1
EntityVertex created 1
Taxon created 1
GeneticallyModifiedResidue created 1
Requirement created 1
Disease created 1
PhysicalEntity created 1
ChemicalDrug created 1
DeletedControlledVocabulary created 1
GenomeEncodedEntity created 1
IntraChainCrosslinkedResidue created 1
GO_BiologicalProcess created 1
ReferenceSequence created 1
BlackBoxEvent created 1
Polymer edited +
GenomeEncodedEntity edited +
EntityWithAccessionedSequence edited +
SimpleEntity edited +
DefinedSet edited +
PhysicalEntity edited +
ReactionlikeEvent edited +
ChemicalDrug edited +
Complex edited +
Polymerisation edited +
Drug edited +
BlackBoxEvent edited +
EntitySet edited +
OtherEntity edited +
Depolymerisation edited +
ProteinDrug edited +
RNADrug edited +
Pathway edited +
CandidateSet edited +
Reaction edited +
FailedReaction edited +
Event edited +
ChemicalDrug revised +
ReactionlikeEvent revised +
PhysicalEntity revised +
DefinedSet revised +
EntityWithAccessionedSequence revised +
SimpleEntity revised +
GenomeEncodedEntity revised +
Polymer revised +
Depolymerisation revised +
OtherEntity revised +
EntitySet revised +
BlackBoxEvent revised +
Drug revised +
Polymerisation revised +
Complex revised +
CandidateSet revised +
Pathway revised +
RNADrug revised +
ProteinDrug revised +
Event revised +
FailedReaction revised +
Reaction revised +
ChemicalDrug reviewed +
PhysicalEntity reviewed +
DefinedSet reviewed +
ReactionlikeEvent reviewed +
GenomeEncodedEntity reviewed +
Polymer reviewed +
SimpleEntity reviewed +
EntityWithAccessionedSequence reviewed +
Depolymerisation reviewed +
EntitySet reviewed +
OtherEntity reviewed +
BlackBoxEvent reviewed +
Complex reviewed +
Drug reviewed +
Polymerisation reviewed +
CandidateSet reviewed +
RNADrug reviewed +
Pathway reviewed +
ProteinDrug reviewed +
Event reviewed +
FailedReaction reviewed +
Reaction reviewed +
PhysicalEntity authored 1
DefinedSet authored 1
ReactionlikeEvent authored +
ChemicalDrug authored 1
Polymer authored 1
GenomeEncodedEntity authored 1
SimpleEntity authored 1
EntityWithAccessionedSequence authored 1
EntitySet authored 1
OtherEntity authored 1
Depolymerisation authored +
Complex authored 1
Polymerisation authored +
Drug authored 1
BlackBoxEvent authored +
CandidateSet authored 1
ProteinDrug authored 1
RNADrug authored 1
Pathway authored +
FailedReaction authored +
Reaction authored +
Event authored +
FailedReaction modified +
Regulation modified +
CatalystActivity modified +
Summation modified +
DatabaseIdentifier modified +
FragmentInsertionModification modified +
InstanceEdit modified +
Edge modified +
OtherEntity modified +
ReferenceDNASequence modified +
ReferenceEntity modified +
Drug modified +
Complex modified +
EvidenceType modified +
ReferenceGeneProduct modified +
DefinedSet modified +
Publication modified +
SimpleEntity modified +
FragmentDeletionModification modified +
Species modified +
Event modified +
Taxon modified +
EntityVertex modified +
GeneticallyModifiedResidue modified +
FragmentReplacedModification modified +
Disease modified +
Requirement modified +
GO_MolecularFunction modified +
FunctionalStatusType modified +
ReferenceIsoform modified +
ReactionVertex modified +
NegativeRegulation modified +
SequenceOntology modified +
Person modified +
PsiMod modified +
EntityFunctionalStatus modified +
BlackBoxEvent modified +
ReferenceSequence modified +
GO_BiologicalProcess modified +
ChemicalDrug modified +
PhysicalEntity modified +
IntraChainCrosslinkedResidue modified +
GenomeEncodedEntity modified +
DeletedControlledVocabulary modified +
Reaction modified +
LiteratureReference modified +
FunctionalStatus modified +
PathwayDiagram modified +
PathwayDiagramItem modified +
CandidateSet modified +
ReferenceMolecule modified +
Pathway modified +
InterChainCrosslinkedResidue modified +
Depolymerisation modified +
ReferenceTherapeutic modified +
Compartment modified +
ExternalOntology modified +
Affiliation modified +
GO_CellularComponent modified +
ControlledVocabulary modified +
ReactionlikeEvent modified +
PathwayVertex modified +
VertexSearchableTerm modified +
TranslationalModification modified +
ReferenceGroup modified +
_Release modified +
ReferenceRNASequence modified +
FrontPage modified +
CrosslinkedResidue modified +
CellType modified +
ReplacedResidue modified +
RNADrug modified +
GroupModifiedResidue modified +
ProteinDrug modified +
PositiveGeneExpressionRegulation modified +
URL modified +
EntitySet modified +
Book modified +
Polymerisation modified +
Figure modified +
DatabaseObject modified +
PositiveRegulation modified +
Vertex modified +
AbstractModifiedResidue modified +
EntityWithAccessionedSequence modified +
Polymer modified +
_Deleted modified +
FragmentModification modified +
ModifiedResidue modified +
NegativeGeneExpressionRegulation modified +
ReferenceDatabase modified +
StableIdentifier modified +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.